The structural and dynamic properties of imidazole in aqueous solution have been studied by means of classical and ab initio molecular dynamics simulations. We developed a new force field for the imidazole molecule with improved modelling of the electrostatic interactions, specifically tailored to address the well known drawbacks of existing force fields based on the atomic fractional charges approach. To this end, we reparametrized the charge distribution on the heterocyclic ring, introducing an extra site accounting for the lone pair on the deprotonated nitrogen. The accuracy of the model in describing the hydrogen bond pattern in aqueous solvent has been confirmed by comparing the classical results on imidazole-water interactions to accurate Car-Parrinello molecular dynamics simulations. The proposed classical model reproduce satisfactorily the experimental water/octanol partition coefficient of imidazole, as well as the structure of the imidazole molecular crystal. The force field has been finally applied to simulate aqueous solutions at various imidazole concentrations to obtain information on both imidazole-water and imidazole-imidazole interactions, providing a description of the different molecular arrangements in solution.

Imidazole in Aqueous Solution: Hydrogen Bond Interactions and Structural Reorganization with Concentration / Pagliai, Marco; Funghi, Giada; Vassetti, Dario; Procacci, Piero; Chelli, Riccardo; Cardini, Gianni. - In: JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL. - ISSN 1520-6106. - STAMPA. - 123:(2019), pp. 4055-4064. [10.1021/acs.jpcb.9b01611]

Imidazole in Aqueous Solution: Hydrogen Bond Interactions and Structural Reorganization with Concentration

Pagliai, Marco
;
Procacci, Piero
;
Chelli, Riccardo;Cardini, Gianni
2019

Abstract

The structural and dynamic properties of imidazole in aqueous solution have been studied by means of classical and ab initio molecular dynamics simulations. We developed a new force field for the imidazole molecule with improved modelling of the electrostatic interactions, specifically tailored to address the well known drawbacks of existing force fields based on the atomic fractional charges approach. To this end, we reparametrized the charge distribution on the heterocyclic ring, introducing an extra site accounting for the lone pair on the deprotonated nitrogen. The accuracy of the model in describing the hydrogen bond pattern in aqueous solvent has been confirmed by comparing the classical results on imidazole-water interactions to accurate Car-Parrinello molecular dynamics simulations. The proposed classical model reproduce satisfactorily the experimental water/octanol partition coefficient of imidazole, as well as the structure of the imidazole molecular crystal. The force field has been finally applied to simulate aqueous solutions at various imidazole concentrations to obtain information on both imidazole-water and imidazole-imidazole interactions, providing a description of the different molecular arrangements in solution.
2019
123
4055
4064
Pagliai, Marco; Funghi, Giada; Vassetti, Dario; Procacci, Piero; Chelli, Riccardo; Cardini, Gianni
File in questo prodotto:
File Dimensione Formato  
Pagliai_revised.pdf

accesso aperto

Descrizione: proofs uncorrected
Tipologia: Pdf editoriale (Version of record)
Licenza: Tutti i diritti riservati
Dimensione 3.22 MB
Formato Adobe PDF
3.22 MB Adobe PDF

I documenti in FLORE sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificatore per citare o creare un link a questa risorsa: https://hdl.handle.net/2158/1154175
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus 10
  • ???jsp.display-item.citation.isi??? 9
social impact