This study compared standard of care testing (SOC) to BioFire® FilmArray® Pneumonia plus Panel (PNplus). PNplus detects 15 bacteria with semiquantitative log bin vasslues, 7 antibiotic resistance markers, three atypical bacteria (AB), and eight viral classes directly from bronchoalveolar lavage-like specimens (BLS) and sputum-like specimens (SLS). Fifty-two laboratories from 13 European countries and Israel tested 1234 BLS and 1242 SLS with PNplus and SOC. Detection rates and number of pathogens/samples were compared for PNplus pathogens. PNplus bin values and SOC quantities were compared. Three thousand two hundred sixty-two bacteria in PNplus were detected by PNplus and/or SOC. SOC detected 57.1% compared to 95.8% for PNplus (p ≤ 0.0001). PNplus semiquantitative bin values were less than SOC, equal to SOC, or greater than SOC in 5.1%, 25.4%, and 69.6% of results, respectively. PNplus bin values were on average ≥ 1 log than SOC values (58.5% 1–2 logs; 11.0% 3–4 logs). PNplus identified 98.2% of MRSA and SOC 55.6%. SOC detected 73/103 AB (70.9%) and 134/631 viruses (21.2%). PNplus detected 93/103 AB (90.3%) and 618/631 viruses (97.9%) (p ≤ 0.0001). PNplus and SOC mean number of pathogens/samples were 1.99 and 1.44, respectively. All gram-negative resistance markers were detected. PNplus and SOC results were fully or partially concordant for 49.1% and 26.4% of specimens, respectively. PNplus was highly sensitive and detected more potential pneumonia pathogens than SOC. Semiquantification may assist in understanding pathogen significance. As PNplus generates results in approximately 1 h, PNplus has potential to direct antimicrobial therapy in near real time and improve antimicrobial stewardship and patient outcomes.
Multinational evaluation of the BioFire® FilmArray® Pneumonia plus Panel as compared to standard of care testing / Ginocchio C.C.; Garcia-Mondragon C.; Mauerhofer B.; Rindlisbacher C.; Forcelledo L.; Fernandez J.; Lienhard R.; Kerschner H.; Rossolini G.M.; Armand-Lefevre L.; d'Humieres C.; Cambau E.; Benmansour H.; Cavallo R.; Altwegg M.; Berlinger L.; Bonnet R.; Saint-Sardos P.; Meex C.; Lavigne J.P.; Leveque N.; Broutin L.; Cattoir V.; Auger G.; Pereira H.; Paitan Y.; Verroken A.; Pailhories H.; Lemarie C.; Martinetti-Lucchini G.; Frigerio Malossa S.; Sanguinetti M.; Spanu T.; Vandenesch F.; Poyart C.; Loubinoux J.; Mira J.P.; Bonacorsi S.; Cointe A.; Munoz P.; Kestler M.; Esteva C.; Queralt X.; Garcia-Rodriguez J.; Gomez M.D.; Lopez-Hontangas J.L.; Ghisetti V.; Burdino E.; Schubert S.; Mencacci A.; Allegrucci F.; Rozemeijer W.; Paternotte N.; Allard A.; Re M.C.; Ambretti S.; Skov M.; Agergaard C.N.; Subudhi P.; Wichelhaus T.A.; Egli A.; Hinic V.; Alcock A.; Banavathi K.; Tiberio C.; Ruocco G.; Atripaldi L.. - In: EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES. - ISSN 0934-9723. - ELETTRONICO. - 40:(2021), pp. 1609-1622. [10.1007/s10096-021-04195-5]
Multinational evaluation of the BioFire® FilmArray® Pneumonia plus Panel as compared to standard of care testing
Rossolini G. M.;Mencacci A.;
2021
Abstract
This study compared standard of care testing (SOC) to BioFire® FilmArray® Pneumonia plus Panel (PNplus). PNplus detects 15 bacteria with semiquantitative log bin vasslues, 7 antibiotic resistance markers, three atypical bacteria (AB), and eight viral classes directly from bronchoalveolar lavage-like specimens (BLS) and sputum-like specimens (SLS). Fifty-two laboratories from 13 European countries and Israel tested 1234 BLS and 1242 SLS with PNplus and SOC. Detection rates and number of pathogens/samples were compared for PNplus pathogens. PNplus bin values and SOC quantities were compared. Three thousand two hundred sixty-two bacteria in PNplus were detected by PNplus and/or SOC. SOC detected 57.1% compared to 95.8% for PNplus (p ≤ 0.0001). PNplus semiquantitative bin values were less than SOC, equal to SOC, or greater than SOC in 5.1%, 25.4%, and 69.6% of results, respectively. PNplus bin values were on average ≥ 1 log than SOC values (58.5% 1–2 logs; 11.0% 3–4 logs). PNplus identified 98.2% of MRSA and SOC 55.6%. SOC detected 73/103 AB (70.9%) and 134/631 viruses (21.2%). PNplus detected 93/103 AB (90.3%) and 618/631 viruses (97.9%) (p ≤ 0.0001). PNplus and SOC mean number of pathogens/samples were 1.99 and 1.44, respectively. All gram-negative resistance markers were detected. PNplus and SOC results were fully or partially concordant for 49.1% and 26.4% of specimens, respectively. PNplus was highly sensitive and detected more potential pneumonia pathogens than SOC. Semiquantification may assist in understanding pathogen significance. As PNplus generates results in approximately 1 h, PNplus has potential to direct antimicrobial therapy in near real time and improve antimicrobial stewardship and patient outcomes.File | Dimensione | Formato | |
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