We present the self-dynamics of protein amino acids of hydrated lysozyme powder around the physiological temperature by means of molecular dynamics simulations. The self-intermediate scattering functions of the amino acid residue center of mass display a logarithmic decay over 3 decades of time, from 2 ps to 2 ns, followed by an exponential alpha relaxation. This kind of slow dynamics resembles the relaxation scenario within the beta-relaxation time range predicted by mode coupling theory in the vicinity of higher-order singularities. These results suggest a strong analogy between the single-particle dynamics of the protein and the dynamics of colloidal, polymeric, and molecular glass-forming liquids.
Logarithmic Decay in Single-Particle Relaxation of Hydrated Lysozyme Powder / M. Lagi; P. Baglioni; SH. Chen. - In: PHYSICAL REVIEW LETTERS. - ISSN 0031-9007. - STAMPA. - 103:(2009), pp. 108102-1-108102-4. [10.1103/PhysRevLett.103.108102]
Logarithmic Decay in Single-Particle Relaxation of Hydrated Lysozyme Powder
LAGI, MARCO;BAGLIONI, PIERO;
2009
Abstract
We present the self-dynamics of protein amino acids of hydrated lysozyme powder around the physiological temperature by means of molecular dynamics simulations. The self-intermediate scattering functions of the amino acid residue center of mass display a logarithmic decay over 3 decades of time, from 2 ps to 2 ns, followed by an exponential alpha relaxation. This kind of slow dynamics resembles the relaxation scenario within the beta-relaxation time range predicted by mode coupling theory in the vicinity of higher-order singularities. These results suggest a strong analogy between the single-particle dynamics of the protein and the dynamics of colloidal, polymeric, and molecular glass-forming liquids.File | Dimensione | Formato | |
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