Here we present DuctApe, a suite that allows the analysis of both genomic sequences and PM data, to find metabolic differences among PM experiments and to correlate them with KEGG pathways and gene presence/absence patterns. As example, an application of the program to four bacterial datasets is presented.
DuctApe: a suite for the analysis and correlation of genomic and OmniLog™ Phenotype Microarray data / Galardini M;Mengoni A;Biondi EG;Semeraro R;Florio A;Bazzicalupo M;Benedetti A;Mocali S. - In: GENOMICS. - ISSN 0888-7543. - ELETTRONICO. - 103:(2014), pp. 1-10. [10.1016/j.ygeno.2013.11.005]
DuctApe: a suite for the analysis and correlation of genomic and OmniLog™ Phenotype Microarray data.
MENGONI, ALESSIO;SEMERARO, ROBERTO;BAZZICALUPO, MARCO;
2014
Abstract
Here we present DuctApe, a suite that allows the analysis of both genomic sequences and PM data, to find metabolic differences among PM experiments and to correlate them with KEGG pathways and gene presence/absence patterns. As example, an application of the program to four bacterial datasets is presented.
File in questo prodotto:
| File | Dimensione | Formato | |
|---|---|---|---|
|
Galardini et al 2014 Genomics.pdf
Accesso chiuso
Tipologia:
Versione finale referata (Postprint, Accepted manuscript)
Licenza:
Tutti i diritti riservati
Dimensione
1.32 MB
Formato
Adobe PDF
|
1.32 MB | Adobe PDF | Richiedi una copia |
I documenti in FLORE sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.
